Metanephros

Lower Urinary Tract

Early Genitourinary System

Male Reproductive System

Female Reproductive System

 

 

Tissue Summary: cortical collecting duct (TS22-TS28)


About

cortical collecting duct description

Segments of the collecting duct located in the cortex of the metanephros.



View cortical collecting duct in GUDMAP Development Tutorials


In Situ Data

Link to cortical collecting duct in-situ data for TS17 Link to cortical collecting duct in-situ data for TS18 Link to cortical collecting duct in-situ data for TS19 Link to cortical collecting duct in-situ data for TS20 Link to cortical collecting duct in-situ data for TS21 Link to cortical collecting duct in-situ data for TS22 Link to cortical collecting duct in-situ data for TS23 Link to cortical collecting duct in-situ data for TS24 Link to cortical collecting duct in-situ data for TS25 Link to cortical collecting duct in-situ data for TS26 Link to cortical collecting duct in-situ data for TS27 Link to cortical collecting duct in-situ data for TS28

Validated Anchor/Marker Genes

Anchors (0)

Anchor genes are defined as genes whose expression is restricted to one temporospatial anatomical compartment. These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Currently no defined anchor genes for this component

 

Markers (3)

Marker genes are defined as genes which display a regional or enriched expression pattern and may be useful in identifying one or more particular temporospatial compartment(s). These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Gene SymbolGene MGI IDMarker OfStageAlso Marker OfGUDMAP IDReference
9230110F11Rik MGI:2444007 cortical collecting duct (EMAPA:28130)
TS23ureteric tip (EMAPA:27605)
GUDMAP:11310
Thiagarajan et al. (2011)
Kitl MGI:96974 cortical collecting duct (EMAPA:28130)
TS23ureteric tip (EMAPA:27605)
GUDMAP:11312
Thiagarajan et al. (2011)
Ppp1r3c MGI:1858229 cortical collecting duct (EMAPA:28130)
TS23medullary collecting duct (EMAPA:28061)
GUDMAP:11318
Thiagarajan et al. (2011)

 

 

Genelists


Published Genelists

Published genelists from Microarray Analysis. Click on the number of probes to go to heatmap view


List NameDescription EntitiesGenesSubmitted ByRefs
UQ Cortical Collecting Duct E15.5Anchor genes specific to key renal compartments: Cortical Collecting Duct E15.57 probesets4Kylie Georgas, Rathi ThiagarajanThiagarajan et al. (2011)

 



Non-Published Genelists

Non-published genelists from Microarray Analysis. Click on the list name or number of probes to go to heatmap view. Microarray Analysis Help.


List NameDescription EntitiesGenesSubmitted ByRefs
DevelopingKidney_e15.5_cortic collect duct_emap-28132_100100 probesets89Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_10001000 probesets829Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_200200 probesets169Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_500500 probesets420Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k1_10013 probesets12Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k1_100073 probesets64Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k1_20070 probesets60Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k1_50071 probesets60Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k2_10016 probesets13Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k2_1000187 probesets159Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k2_20030 probesets26Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k2_50095 probesets82Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k3_10031 probesets28Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k3_1000151 probesets132Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k3_20060 probesets58Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k3_50027 probesets24Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k4_10018 probesets18Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k4_1000442 probesets401Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k4_20030 probesets24Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k4_500191 probesets177Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k5_10022 probesets19Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k5_1000147 probesets126Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k5_20010 probesets8Bruce Aronow
DevelopingKidney_e15.5_cortic collect duct_emap-28132_k5_500116 probesets97Bruce Aronow