Metanephros

Lower Urinary Tract

Early Genitourinary System

Male Reproductive System

Female Reproductive System

 

 

Tissue Summary: immature loop of Henle (TS22-TS24)


About

immature loop of Henle description

Early tubular segment of capillary loop and maturing stage nephrons.



View immature loop of Henle in GUDMAP Development Tutorials


In Situ Data

Link to immature loop of Henle in-situ data for TS17 Link to immature loop of Henle in-situ data for TS18 Link to immature loop of Henle in-situ data for TS19 Link to immature loop of Henle in-situ data for TS20 Link to immature loop of Henle in-situ data for TS21 Link to immature loop of Henle in-situ data for TS22 Link to immature loop of Henle in-situ data for TS23 Link to immature loop of Henle in-situ data for TS24 Link to immature loop of Henle in-situ data for TS25 Link to immature loop of Henle in-situ data for TS26 Link to immature loop of Henle in-situ data for TS27 Link to immature loop of Henle in-situ data for TS28

Validated Anchor/Marker Genes

Anchors (1)

Anchor genes are defined as genes whose expression is restricted to one temporospatial anatomical compartment. These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Gene SymbolGene MGI IDAnchor OfStageAlso Marker ofGUDMAP IDReference
Umod MGI:102674 immature loop of Henle (EMAPA:28049)
TS23renal proximal convoluted tubule (EMAPA:28287)
loop of Henle, inner medullary portion (EMAPA:28352)
thin ascending limb (EMAPA:28361)
distal convoluted tubule (EMAPA:28393)
distal straight tubule (EMAPA:28396)
loop of Henle (EMAPA:29665)
distal straight tubule (EMAPA:29671)
loop of Henle (EMAPA:29679)
premacula segment of distal straight tubule (EMAPA:29683)
GUDMAP:9104
Thiagarajan et al. (2011)

 

Markers (17)

Marker genes are defined as genes which display a regional or enriched expression pattern and may be useful in identifying one or more particular temporospatial compartment(s). These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Gene SymbolGene MGI IDMarker OfStageAlso Marker OfGUDMAP IDReference
0610005C13Rik MGI:1918911 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
renal proximal convoluted tubule (EMAPA:28287)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:13955
Thiagarajan et al. (2011)
2310046K01Rik MGI:1916948 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
GUDMAP:10780
Thiagarajan et al. (2011)
Aldh1l1 MGI:1340024 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
early distal tubule (EMAPA:28007)
GUDMAP:13954
Thiagarajan et al. (2011)
Ambp MGI:88002 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
GUDMAP:13579
Thiagarajan et al. (2011)
Clic6 MGI:2146607 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
GUDMAP:9149
Thiagarajan et al. (2011)
Fbp2 MGI:95491 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
GUDMAP:13581
Thiagarajan et al. (2011)
Gpd1 MGI:95679 immature loop of Henle (EMAPA:28049)
TS23cortical renal tubule (EMAPA:18976)
capillary loop renal corpuscle (EMAPA:27770)
maturing renal corpuscle (EMAPA:27943)
renal proximal convoluted tubule (EMAPA:28287)
GUDMAP:9047
Thiagarajan et al. (2011)
Gyk MGI:106594 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
early distal tubule (EMAPA:28007)
renal proximal convoluted tubule (EMAPA:28287)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:9155
Thiagarajan et al. (2011)
Kcnj1 MGI:1927248 immature loop of Henle (EMAPA:28049)
TS23early distal tubule (EMAPA:28007)
GUDMAP:20762
Thiagarajan et al. (2011)
Napsa MGI:109365 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:10917
Thiagarajan et al. (2011)
Pter MGI:107372 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
renal proximal convoluted tubule (EMAPA:28287)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:8210
Thiagarajan et al. (2011)
Serpina10 MGI:2667725 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
GUDMAP:9131
Thiagarajan et al. (2011)
Sigirr MGI:1344402 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
early distal tubule (EMAPA:28007)
GUDMAP:10776
Thiagarajan et al. (2011)
Slc23a1 MGI:1341903 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:9176
Thiagarajan et al. (2011)
Susd2 MGI:1918983 immature loop of Henle (EMAPA:28049)
TS23cortical renal tubule (EMAPA:18976)
capillary loop renal corpuscle (EMAPA:27770)
maturing renal corpuscle (EMAPA:27943)
GUDMAP:9170
Thiagarajan et al. (2011)
Tmem72 MGI:2442707 immature loop of Henle (EMAPA:28049)
TS23early distal tubule (EMAPA:28007)
GUDMAP:20769
Thiagarajan et al. (2011)
Ttr MGI:98865 immature loop of Henle (EMAPA:28049)
TS23early proximal tubule (EMAPA:28003)
renal proximal straight tubule (EMAPA:29661)
GUDMAP:11016
Thiagarajan et al. (2011)

 

 

Genelists


Published Genelists

Published genelists from Microarray Analysis. Click on the number of probes to go to heatmap view


List NameDescription EntitiesGenesSubmitted ByRefs
UQ Loop Of Henle E15.5Anchor genes specific to key renal compartments: Loop Of Henle E15.53 probesets3Kylie Georgas, Rathi ThiagarajanThiagarajan et al. (2011)

 



Non-Published Genelists

There are currently no defined non-published genelists for this component