Tissue Summary: cap mesenchyme (TS19-TS28)
cap mesenchyme description
Condensed mesenchymal cells located around the tips of the ureteric bud tree. A complex communication between the tip and these cells will induce the cap mesenchyme which begins nephrogenesis.
View cap mesenchyme in GUDMAP Development Tutorials
In Situ Data
Validated Anchor/Marker Genes
Anchor genes are defined as genes whose expression is restricted to one temporospatial anatomical compartment. These have been selected by microarray analyses followed by validation using section in-situ hybridisation.
Currently no defined anchor genes for this component
Marker genes are defined as genes which display a regional or enriched expression pattern and may be useful in identifying one or more particular temporospatial compartment(s). These have been selected by microarray analyses followed by validation using section in-situ hybridisation.
Published genelists from Microarray Analysis. Click on the number of probes to go to heatmap view
|List Name||Description||Entities||Genes||Submitted By||Refs|
|UQ Cap Mesenchyme E15.5||Anchor genes specific to key renal compartments: Cap Mesenchyme E15.5||32 probesets||32||Kylie Georgas, Rathi Thiagarajan||Thiagarajan et al. (2011)|
|Cap Mesenchyme 15.5dpc||Brunskill et al.: Cap Mesenchyme 15.5dpc||374 probesets||277||Bruce Aronow, Eric Brunskill||Brunskill et al. (2008)|
|K-means clustered - all from Brunskill et al. (2008)||Brunskill et al.: All k-means clustered probesets||7599 probesets||4757||Bruce Aronow, Eric Brunskill||Brunskill et al. (2008)|
Non-published genelists from Microarray Analysis. Click on the list name or number of probes to go to heatmap view. Microarray Analysis Help.