Metanephros

Lower Urinary Tract

Early Genitourinary System

Male Reproductive System

Female Reproductive System

 

 

Tissue Summary: pretubular aggregate (TS20-TS28)


About

pretubular aggregate description

Small pre-epithelial aggregates of induced mesenchymal cells located underneath the tips of the ureteric bud tree. The aggregates undergo a mesenchymal to epithelial transition during the first steps of nephron formation.



View pretubular aggregate in GUDMAP Development Tutorials


In Situ Data

Link to pretubular aggregate in-situ data for TS17 Link to pretubular aggregate in-situ data for TS18 Link to pretubular aggregate in-situ data for TS19 Link to pretubular aggregate in-situ data for TS20 Link to pretubular aggregate in-situ data for TS21 Link to pretubular aggregate in-situ data for TS22 Link to pretubular aggregate in-situ data for TS23 Link to pretubular aggregate in-situ data for TS24 Link to pretubular aggregate in-situ data for TS25 Link to pretubular aggregate in-situ data for TS26 Link to pretubular aggregate in-situ data for TS27 Link to pretubular aggregate in-situ data for TS28

Validated Anchor/Marker Genes

Anchors (0)

Anchor genes are defined as genes whose expression is restricted to one temporospatial anatomical compartment. These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Currently no defined anchor genes for this component

 

Markers (8)

Marker genes are defined as genes which display a regional or enriched expression pattern and may be useful in identifying one or more particular temporospatial compartment(s). These have been selected by microarray analyses followed by validation using section in-situ hybridisation.

Gene SymbolGene MGI IDMarker OfStageAlso Marker OfGUDMAP IDReference
Ccnd1 MGI:88313 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
renal connecting tubule of s-shaped body (EMAPA:27758)
distal segment of s-shaped body (EMAPA:27760)
medial segment of s-shaped body (EMAPA:27762)
early tubule (EMAPA:28500)
GUDMAP:11180
Georgas et al. (2009)
Cdh4 MGI:99218 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
early tubule (EMAPA:28500)
GUDMAP:7822
Georgas et al. (2009)
Dll1 MGI:104659 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
medial segment of s-shaped body (EMAPA:27762)
early tubule (EMAPA:28500)
distal renal vesicle (EMAPA:31582)
GUDMAP:11371
Georgas et al. (2009)
Greb1 MGI:2149712 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
medial segment of s-shaped body (EMAPA:27762)
early tubule (EMAPA:28500)
distal renal vesicle (EMAPA:31582)
GUDMAP:8891
Georgas et al. (2009)
Lhx1 MGI:99783 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
distal segment of s-shaped body (EMAPA:27760)
medial segment of s-shaped body (EMAPA:27762)
early tubule (EMAPA:28500)
renal connecting segment of renal vesicle (EMAPA:31541)
distal renal vesicle (EMAPA:31582)
GUDMAP:13416
GUDMAP:7928
GUDMAP:8211
Georgas et al. (2009)
Thiagarajan et al. (2011)
Tmem100 MGI:1915138 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
proximal segment of s-shaped body (EMAPA:27764)
parietal epithelium of s-shaped body (EMAPA:27768)
early tubule (EMAPA:28500)
proximal renal vesicle (EMAPA:31549)
GUDMAP:8888
GUDMAP:8886
Georgas et al. (2009)
Wnt4 MGI:98957 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
medial segment of s-shaped body (EMAPA:27762)
early tubule (EMAPA:28500)
GUDMAP:7156
GUDMAP:8208
GUDMAP:8209
Georgas et al. (2009)
Thiagarajan et al. (2011)
Wt1 MGI:98968 pretubular aggregate (EMAPA:27673)
TS23renal vesicle (EMAPA:27678)
comma-shaped body (EMAPA:27681)
s-shaped body (EMAPA:27756)
proximal segment of s-shaped body (EMAPA:27764)
early tubule (EMAPA:28500)
proximal renal vesicle (EMAPA:31549)
GUDMAP:8200
Georgas et al. (2009)

 

 

Genelists


Published Genelists

There are currently no defined published genelists for this component

 



Non-Published Genelists

There are currently no defined non-published genelists for this component